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Albert Einstein College of Medicine
Department of Biochemistry
1300 Morris Park Ave
Bronx, NY, 10461-1602 |
| Matthew W. Vetting |
(718) 430-2785
vetting@aecom.yu.edu |
Peer-Reviewed
Publications
- Vetting MW, Hegde SS, Blanchard JS. (2009) "Crystallization of a pentapeptide-repeat protein by reductive cyclic pentylation of free amines with glutaraldehyde." Acta Crystallogr D Biol Crystallogr. 65(Pt 5), 462-9.
- Tremblay LW, Fan F, Vetting MW, Blanchard JS (2008) "The 1.6 A crystal structure of Mycobacterium smegmatis MshC: the penultimate enzyme in the mycothiol biosynthetic pathway."
Biochemistry. 47(50):13326-35.
- Vetting MW, Errey JC, Blanchard JS. (2008) " Rv0802c from Mycobacterium tuberculosis: the first structure of a succinyltransferase with the GNAT fold."
Acta Crystallogr Sect F Struct Biol Cryst Commun. 64(Pt 11):978-85
- Vetting MW, Park CH, Hegde SS, Jacoby GA, Hooper DC, Blanchard JS. (2008) "Mechanistic and structural analysis of aminoglycoside N-acetyltransferase AAC(6')-Ib and its bifunctional, fluoroquinolone-active AAC(6')-Ib-cr variant." Biochemistry. 47(37):9825-35.
- Vetting MW, Bareich DC, Yu M, Blanchard JS. (2008) "Crystal structure of RimI from Salmonella typhimurium LT2, the GNAT responsible for N(alpha)-acetylation of ribosomal protein S18." Protein Sci. 17(10):1781-90.
- Vetting MW, Frantom PA, Blanchard JS. (2008) "Structural and enzymatic analysis of MshA from corynebacterium glutamicum: Substrate-assisted catalysis." J Biol Chem. 283(23):15834-44.
- Magalhães ML, Vetting MW, Gao F, Freiburger L, Auclair K, Blanchard JS. (2008) "Kinetic and Structural Analysis of Bisubstrate Inhibition of the Salmonella enterica Aminoglycoside 6'-N-Acetyltransferase." Biochemistry. 47(2):579-84.
- Argyrou A, Vetting MW, Blanchard JS. (2007) "New insight into the mechanism of action of and resistance to isoniazid: interaction of Mycobacterium tuberculosis enoyl-ACP reductase with INH-NADP."
J Am Chem Soc. 129(31):9582-3.
- Hegde SS, Chandler J, Vetting MW, Yu M, Blanchard JS. (2007) "Mechanistic and structural analysis of human spermidine/spermine N1-acetyltransferase." Biochemistry. 46(24):7187-95.
- Olsen LR, Vetting MW, Roderick SL. (2007) "Structure of the E. coli bifunctional GlmU acetyltransferase active site with substrates and products." Protein Sci. 16(6):1230-5.
- Andreassi JL 2nd, Bilder PW, Vetting MW, Roderick SL, Leyh TS. (2007) "Crystal structure of the Streptococcus pneumoniae mevalonate kinase in complex with diphosphomevalonate."
Protein Sci. 16(5):983-9.
- Vetting MW, Hegde SS, Hazleton KZ, Blanchard JS. (2007) "Structural characterization of the fusion of two pentapeptide repeat proteins, Np275 and Np276, from Nostoc punctiforme: resurrection of an ancestral protein." Protein Sci. 16(4):755-60.
- Argyrou A, Vetting MW, Aladegbami B, Blanchard
JS. (2006) "Mycobacterium tuberculosis dihydrofolate
reductase is a target for isoniazid."
Nat Struct Mol Biol. 13: 408 - 413
- Vetting MW, Hegde SS, Fajardo JE, Fiser A, Roderick
SL, Takiff HE, Blanchard JS. (2006) "Pentapeptide Repeat
Proteins."
Biochemistry. 45(1):1-10
- Vetting MW, Yu M, Rendle PM, Blanchard JS. (2006) "The Substrate-induced Conformational Change of Mycobacterium
tuberculosis Mycothiol Synthase." J
Biol Chem. 281(5):2795-802
- Earhart CA, Vetting MW, Gosu R, Michaud-Soret
I, Que L Jr, Ohlendorf DH. (2005) "Structure of catechol
1,2-dioxygenase from Pseudomonas arvilla. Biochem
Biophys Res Commun. 338(1):198-205.
- Valley MP, Brown CK, Burk DL, Vetting MW, Ohlendorf
DH, Lipscomb JD. (2005) "Roles of the equatorial tyrosyl
iron ligand of protocatechuate 3,4-dioxygenase in catalysis."
Biochemistry.
44(33):11024-39.
- Hegde SS, Vetting MW, Roderick SL, Mitchenall
LA, Maxwell A, Takiff HE, Blanchard JS. (2005)
"A fluoroquinolone resistance protein from Mycobacterium
tuberculosis that mimics DNA."
Science.
308(5727):1480-3.
- Vetting MW, de Carvalho LP, Roderick SL, Blanchard
JS. (2005) "A Novel Dimeric Structure of the RimL Na-acetyltransferase
from Salmonella typhimurium." J
Biol Chem. 280(23):22108-14.
- Vetting MW, S de Carvalho LP, Yu M, Hegde SS,
Magnet S, Roderick SL, Blanchard JS. (2005) "Structure
and functions of the GNAT superfamily of acetyltransferases.
Arch
Biochem Biophys. 433(1):212-26.
- Brown CK, Vetting MW, Earhart CA, Ohlendorf
DH. (2004) "Biophysical analyses of designed and selected
mutants of protocatechuate 3,4-dioxygenase."
Annu
Rev Microbiol. 58:555-85.
- Argyrou A, Vetting MW, Blanchard JS. (2004)
"Characterization of a new member of the flavoprotein disulfide
reductase family of enzymes from Mycobacterium tuberculosis."
J
Biol Chem. 279(50):52694-702.
- Olsen L.R, Huang B, Vetting MW, Roderick SL,
(2004) "Structure of Serine Acetyltransferase in Complexes
with CoA and Its Cysteine Feedback Inhibitor."
Biochemistry,
43(20):6013-9.
- Vetting MW, Magnet S, Nieves E, Roderick SL,
Blanchard JS. (2004) "A bacterial acetyltransferase capable
of regioselective N-acetylation of antibiotics and histones."
Chemistry & Biology, 11(4):565-73.
- Vetting MW, Wackett LP, Que L Jr, Lipscomb JD,
Ohlendorf DH. (2004) "Crystallographic comparison of manganese-
and iron-dependent homoprotocatechuate 2,3-dioxygenases."
J
Bacteriol. 2004, 186(7):1945-58.
- Vetting MW, Roderick SL, Yu M, Blanchard JS.
(2003). Crystal structure of mycothiol synthase (Rv0819) from Mycobacterium
tuberculosis shows structural homology to the GNAT family of N-acetyltransferases.
Protein
Science, 12(9):1954-9.
- Vetting M, Roderick SL, Hegde S, Magnet S, Blanchard
JS. (2003). What can structure tell us about in vivo function?
The case of aminoglycoside-resistance genes.
Biochem
Soc. Trans.31(Pt 3):520-2.
- Vetting MW, Hegde SS, Javid-Majd F, Blanchard
JS, Roderick SL. (2002). Aminoglycoside 2'-N-acetyltransferase
from Mycobacterium tuberculosis in complex with coenzyme A and aminoglycoside
substrates. Nature
Structural Biology, 9(9):653-8.
- Roderick SL, Chan WW, Agate DS, Olsen LR, Vetting
MW, Rajashankar KR, Cohen DE. (2002) Structure of human phosphatidylcholine
transfer protein in complex with its ligand.
Nature Structural Biology, 9(7):507-11.
- Ohlendorf, D.H., & Vetting, M.W. (2001).
Protocatechuate 3,4-Dioxygenase.
Contribution
for: Handbook of Metalloproteins. Volume 1, ISBN: 0-471-62743-7
- Vetting MW, D'Argenio DA, Ornston LN, Ohlendorf
DH. (2000) Structure of Acinetobacter strain ADP1 protocatechuate
3, 4-dioxygenase at 2.2 Å resolution: implications for the
mechanism of an intradiol dioxygenase. Biochemistry.
39(27): 7943-55.
- Vetting, M.W., & Ohlendorf, D.H., (2000).
The 1.8 Å Crystal Structure of Catechol 1,2-Dioxygenase Reveals
a Novel Hydrophobic Helical Zipper as a Subunit Linker.
Structure
Folding & Design, 8(4), 429-40
- D'Argenio, D.A., Vetting, M.W., Ohlendorf, D.H., & Ornston, L.N. (1999). Substitution, Insertion, Deletion, Suppression,
and Altered Substrate Specificity in Functional Protocatechuate
3,4-Dioxygenases.
J. Bact., 181, 6478-6487
- Vetting, M.W., Earhart, C.A., & Ohlendorf, D.H. (1994). Crystallization and Preliminary X-ray Analysis of Protocatechuate
3,4-Dioxygenase from Acinetobacter calcoaceticus.
J. Mol. Biol., 236, 372-373
- "The Pentapeptide Repeat Fold and Fluroquinolone
Resistance " 9th Annual Summer Meeting, New York Structural
Biology Group, (July 19, 2006)
- "Structural Studies of Aminoglycoside Acetyltransferases,
What Can Structure Tell us About in vivo Function?" Department
of Pathology, New York Medical College (Dec 14, 2003)
-
"A Comparison of the X-Ray Crystal
Structures of Intradiol and Extradiol Dioxygenases" to the Metalloprotein
Interest Group, University of Minnesota (June 1, 1999)
-
"Structural Studies of Homoprotocatechuate
2,3-Dioxygenase" to the Metalloprotein Interest Group, University
of Minnesota (May 5, 1998)
-
"Structural Studies of Protocatechuate
3,4-Dioxygenase and Related Enzymes" to the Metalloprotein Interest
Group, University of Minnesota (June 6, 1996)
Professional
Activities and Honors
- 2004 Outstanding Postdoctoral Award: Albert Einstein
College of Medicine (Sept, 2004)
- Young Scientist Special Interest Group (YSSIG)
American Crystallographic Association Chair 2001-2002
- Member of Metalloprotein Interest Group, University
of Minnesota
- Linus Pauling Poster Prize Winner ACA Conference
for Poster Titled "High Resolution Native and Complex Structures
of Catechol 1,2-Dioxygenase from Acinetobacter sp. ADP1." (June,
1999)
- Competitive Biophysics Training Grant (Oct1995
- Oct1998)
- Life Sciences Summer Programs Research Grant (June
92 - Aug 92)
- Undergraduate Research Opportunities Program Grant
(Jan 92 - June 92)
Professional
Conferences Attended
- American Crystallographic Association (ACA) Conference,
Orlando, FL.. (May, 2005)
- American Crystallographic Association (ACA) Conference,
Chicago, IL. (July, 2004)
- American Crystallographic Association (ACA) Conference,
Covington, KY. (July, 2003)
- American Crystallographic Association (ACA) Conference,
Austin, TX. (July, 2002)
- American Crystallographic Association (ACA) Conference,
Los Angeles, CA. (July, 2001)
- American Crystallographic Association (ACA) Conference,
St. Paul, MN. (July, 2000)
- ICBIC 9: 9th International Conference on Biological
Inorganic Chemistry, Minneapolis, Minnesota. (July 1999)
- American Crystallographic Association (ACA) Conference,
Buffalo, N.Y. (June, 1999)
- Proteins Gorden Conference, Tilton, N.H. (June,
1995)
- Protein Engineering and Design, Urbana, Il (June,
1994)
- Protein Engineering and Design, Urbana, Il (June,
1993)
Education/Positions
- Instructor, AECOM 2007-present
- Postdoctoral Research Associate, AECOM; 2001-2007
- University of Minnesota, Twin Cities; Ph.D. (2001)
- University of Minnesota, Twin Cities; B.S. Biochemistry
(1988-1993)
Research
and Professional Experience
- Teaching Assistant, Department of Biochemistry,
University of Minnesota, Winter 95, Biochemistry for Medical Technicians
- Teaching Assistant, Department of Biochemistry,
University of Minnesota, Spring 94, 2nd Quarter of Biochemistry
for Medical Students
- Laboratory Technician, Department of Biochemistry,
University of Minnesota (Jan91 - Sept 93)
PDB
Coordinates Deposited at RSCB
| Protocatechuate 3,4-dioxygenase
from Acinetobacter calcoaceticus |
1EO2 |
1EO9 |
1EOA |
1EOC |
1EOB |
2BUV |
| |
2BUM |
2BUQ |
2BUR |
2BUT |
2BUU |
2BUW |
| |
2BUX |
2BUY |
2BUZ |
2BUV |
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Catechol 1,2-dioxygenase from
Acinetobacter calcoaceticus
|
1DLM
|
1DLQ
|
1DLT
|
1DLM |
|
| Homoprotocatechuate 2,3-dioxygenase
from Arthrobacter globiformus |
1F1U
|
1F1R
|
1F1V
|
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Homoprotocatechuate 2,3-dioxygenase from
Brevibacterium fuscum
|
1F1X
|
1Q0O
|
1Q0C
|
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| 2'-N-Aminoglycoside Acetyltransferase
from Mycobacterium tuberculosis |
1M44 |
1M4D
|
1M4G
|
1M4I |
|
Mycothiol Synthase from
Mycobacterium tuberculosis |
1OZP |
1P0H |
2C27
|
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| 3-carboxymucconate
cycloisomerase from Acintebacter calcoaceticus |
1Q5N |
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| 6'-N-Aminoglycoside
Acetyltransferase from Salmonella enterica |
1S3Z
|
1S5K
|
1S60
|
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| LPDA (Rv3303C) Flavoprotein
Reductase |
1XDI |
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| RimL from Salmonella
typhimurium |
1S7F |
1S7K |
1S7L |
1S7N |
| MfpA pentapeptide
repeat protein from Mycobacterium tuberculosis |
2BM4 |
2BM5 |
2BM6 |
2BM7 |
|
DHFR from Mycobacterium tuberculosis with
INH-NADP
|
2CIG |
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| Nostoc punctiforme pentepeptide repeat proteins Np0275 and Np0276 |
2J8I |
2J8K |
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| Human Spermine/Spermidine Acetyltransferase |
2JEV |
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